Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790925.1_cds_XP_016504545.1_1707
CDS Infomation

[gene=LOC107822492] [db_xref=GeneID:107822492] [protein=uncharacterized protein LOC107822492 isoform X2] [protein_id=XP_016504545.1] [location=join(6061..6157,6252..6448,6613..6720,6824..8640,8871..9000)] [gbkey=CDS]
Sequence

ATGGCTACCAAGCGTTCCTGTACATCATCTCTACCCTGGATTTGGGTGATTGAAGCACTA
GCAAGCTTCAATGAAATAGATACATCTTTACTCATCAATTTGGTTAAGAGGACTCCTGAA
ATTTCCGATGATCTGGGGAGAAATGCTAGGGAAATGGTTTCCTTGAGAGTTTTAGAGAGC
TTATTTGTCCAGAGAATCCCGAAAGCAAATAATGTTGCTTCAGTTCCAGGTGCCAATATT
GAACTTGATCCATCAAAGAGCTGTGAAGATGTCCTTCGCTGCATATTGTTGGAGGCTTCT
GCATCAGATTTAAAAACAGCAGCGCCTGAGATGTTGAAATGGGATGTTCGGTCATTCATT
ATGAAAAAGAGATCTCTCCTGCCGAAGTGTCTTTTGAAACAACTTAAAGATAACATTGTA
GATTCTACCAGTCCTCTTTCTGGATCCTTGAAAAAAAGAAGTCGATTGGAGTTCGGGAAT
CACTCCAGAGATAGTGTTCCTGTTGATGCTGTTGATTCTGATGGCTTTAAGCAGGGACAT
GAAGTAGGAGGCACAAATACCCAACATGTTGCACCAACTAGGAACTCGGATGCTTTTACC
CAAGCTGATAAAAATACAACAACATACCCAGTATATTCCCACAGTGTGGGGTCCGGGAAG
GATAATGTGTACGCAGACCTTACCCCTACCTTTTGGAGGACCCAGTCCGATAAAAATGGC
AAGCAAAAAAGTCAGCTAGGAAGCGCTCTGGTGCGTGCTAAGAGGAGTATCGATGCCTCC
ACTGCTCATGAAGTAGAAGTCAATGAAACTGAAGCCATATCAGAGAACAGTTCTGATCCT
TGTGCTAAGGCTGCCAAGAAGTTTAAGCAGTTTGTCTTTAGTCCCATTCGGAACACAGTT
CCTGATTTGCTATTGTCTGGGAGAGATGCATTCCCAGCAGAATCATCTGGAGGAAGTCAA
CCTATTGTTCAAAACGGGAACTCGAAAGATGAAGCTCAAGTTGGGGCCTTCGAAGCAAAT
GGAGGCCTGAACGATGGTTGTGCTGAGCATGCTGCATCAAGAAGTGGTTTACATGGAAGT
GACTCTAATCACAATGAGCTCTTGCCTCAAAGAATGAGCACAGACCAAAAGTTCCAAAAT
ATTGGACGTAGCAGCAATGGTTGCGCTGAACTTGGAACATCCAGTGGCTCATGCCAGCTG
GCGATTCAACAAGATTCTCGCACTCATGGATCCAAACATGACCTGGAGTTTAATCTTCCA
CAAGATTTGCAACATGGTGAGCCTTCTAAAGTAGCCAAAGAGAATATTGAGCAAAGTCAT
GAATTTGAGTTCTCTAGTGATACTGATGAGTATCACGATGAGAGCATTGCTCTTGCTACA
CAGAAGAATGATTTCTTGAGCTCGCAATGTGCTCAGGGTGAAGATTCTTTGGCAGCTGCT
GATTGTAGTGAGCTTAATCTTTGTGTGAAGTGTAATGTAGGGGGGAAATTATTTGTCTGT
AGTTCTGACACCTGCCCATTAATGGTTCATGAAAGTTGCTTGGGTTCTGTGCCCAACTTT
GATTACAAAGGGAACTTCTACTGCCCCTTTTGTGCATATTCTCGAGCAATTTCTGAATAC
CTGGACGGTAAGAAGAAGGTCTCACTTGCTAGGAAACATTTGGCTGCATTTATTGGCTTG
GGAGCTGGACAACAATCAAAGAAGTCACTACCTAAGTCACAAGGAACGAAACCGCATCAA
TCTCGAGAGGATAAGAATGAGCAATTATGCCACAATGAGAATGGGAGCAGTTCCTTGAAT
GAGGTTACAGAAGCAGGAAGTGCTCCAGGCGACAGGAATTCCGTTGGAGTTCAAATCATG
CAGACGGGTTCACCTCAACCAGAGGCTTCTGCACCTGAACAATGCTTGGTAGCTGGTCAA
CAACCTGAAGGATCAGAACTTAGATGTCATAGATCTAAGCAGAATCAGTCCAGAGAGGAA
GAAGAGTTGTGTCATAATGGGAATGGAAACAAGAATTCTTTGAAGAAGGCTGAAGAAGCG
GGAAGTGGTCCTGTTAATAGAAATTCTACGAATGCTGAACTCATGCAGATGCATCCACCT
CAACCACCTGTTTCTCATGAACCTGTGTGTCAAGGAAGTTCTTCTATAGAAGAAAATTCT
GAAGAAGATGAGATTGGTTCCAGATATCGTGTACAATTTAGGAATCCAGAGAAGAAGCAT
ACCTTTCCCATAACACCTCAATTGAGGAGGAAGAAGGTCCAATGGACAAAGATAGAGGAG
GAAACGTTAAAGGTACACGCATCTTCTTTCTGTCTAAATTTGCTAGTTCTCTCCTTGAAA
AGCTGGTAA

Peptide Sequence

PEP ID

XP_016504545.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107822492 isoform X2 [Nicotiana tabacum]
Sequence

MATKRSCTSSLPWIWVIEALASFNEIDTSLLINLVKRTPEISDDLGRNAREMVSLRVLES
LFVQRIPKANNVASVPGANIELDPSKSCEDVLRCILLEASASDLKTAAPEMLKWDVRSFI
MKKRSLLPKCLLKQLKDNIVDSTSPLSGSLKKRSRLEFGNHSRDSVPVDAVDSDGFKQGH
EVGGTNTQHVAPTRNSDAFTQADKNTTTYPVYSHSVGSGKDNVYADLTPTFWRTQSDKNG
KQKSQLGSALVRAKRSIDASTAHEVEVNETEAISENSSDPCAKAAKKFKQFVFSPIRNTV
PDLLLSGRDAFPAESSGGSQPIVQNGNSKDEAQVGAFEANGGLNDGCAEHAASRSGLHGS
DSNHNELLPQRMSTDQKFQNIGRSSNGCAELGTSSGSCQLAIQQDSRTHGSKHDLEFNLP
QDLQHGEPSKVAKENIEQSHEFEFSSDTDEYHDESIALATQKNDFLSSQCAQGEDSLAAA
DCSELNLCVKCNVGGKLFVCSSDTCPLMVHESCLGSVPNFDYKGNFYCPFCAYSRAISEY
LDGKKKVSLARKHLAAFIGLGAGQQSKKSLPKSQGTKPHQSREDKNEQLCHNENGSSSLN
EVTEAGSAPGDRNSVGVQIMQTGSPQPEASAPEQCLVAGQQPEGSELRCHRSKQNQSREE
EELCHNGNGNKNSLKKAEEAGSGPVNRNSTNAELMQMHPPQPPVSHEPVCQGSSSIEENS
EEDEIGSRYRVQFRNPEKKHTFPITPQLRRKKVQWTKIEEETLKVHASSFCLNLLVLSLK
SW

Transcript Sequence

Gene sequence data has not been registered.